Examples

• Test for positional dependence:indep.sas
     Updated: 01/08/05 at 11:18:56 AM
• Signal Analysis:
  • Data input: signal_data.sas
       Updated: 01/08/05 at 11:19:01 AM
  • Weight Matrix: signal_weight.sas
       Updated: 01/08/05 at 11:19:02 AM
  • First Order: signal_fo.sas
       Updated: 01/08/05 at 11:19:02 AM
  • MDD: signal_mdd.sas
       Updated: 01/08/05 at 11:19:02 AM
  • Catmod: signal_catmod.sas
       Updated: 01/08/05 at 11:19:01 AM
  • Catmod Macro: signal_catmod2.sas
       Updated: 01/08/05 at 11:19:01 AM
• BLOSUM substitution matrix:blosum.sas
     Updated: 01/08/05 at 11:18:52 AM
• PAM substitution matrix:pam.sas
     Updated: 01/08/05 at 11:18:59 AM
• BLAST Random Walk:blast.sas
     Updated: 01/08/05 at 11:18:52 AM
• BLAST Score calculation:blast-score.sas
     Updated: 01/08/05 at 11:18:52 AM
  Data Sets
  • BLOSUM62:BLOSUM62
       Updated: 01/08/05 at 11:18:53 AM
  • BLOSUM62:BLOSUM62.fasta
       Updated: 01/08/05 at 11:18:53 AM
  • Query Segment:query2.txt
       Updated: 01/08/05 at 11:19:00 AM
  • Subject Segment:subj2.txt
       Updated: 01/08/05 at 11:19:02 AM
  • Query Segment:query-9.5.fasta
       Updated: 01/08/05 at 11:19:00 AM
  • Subject Segment:subj-9.5.fasta
       Updated: 01/08/05 at 11:19:02 AM
• BLAST Statistics calculation:blast-calc.sas
     Updated: 01/08/05 at 11:18:52 AM
• BLAST Poisson calculation:blast-pois.sas
     Updated: 01/08/05 at 11:18:52 AM
• BLAST Sum Statistic calculation:sumint.sas
     Updated: 03/01/05 at 02:25:52 PM
• Markov chains:markov.sas
     Updated: 01/08/05 at 11:18:57 AM